BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028A01SP1|AL428817
(880 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1664 1734 0.0
>3x_Contig1664
Length = 15696
Score = 1734 bits (874), Expect = 0.0
Identities = 875/876 (99%)
Strand = Plus / Minus
Query: 5 tasggccaaatgtctttagtaacgctaacaatagcgatttcctatcagtccaaagttcgt 64
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14876 tagggccaaatgtctttagtaacgctaacaatagcgatttcctatcagtccaaagttcgt 14817
Query: 65 attcccaattagcttcgacggcagtagtggcctcagcgatgtctaagtcaaaaggtggca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14816 attcccaattagcttcgacggcagtagtggcctcagcgatgtctaagtcaaaaggtggca 14757
Query: 125 atggcatattagaaggatcctcaatcttattagcatgataagtgtccatgatcaatttat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14756 atggcatattagaaggatcctcaatcttattagcatgataagtgtccatgatcaatttat 14697
Query: 185 tcatccaggtgaatgagatcccagctagaacgttaactggaggataaatattgtttactg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14696 tcatccaggtgaatgagatcccagctagaacgttaactggaggataaatattgtttactg 14637
Query: 245 cgaaataatttgtcaattgtggggagcacttgaaaaggaaggtatcatagcaaaagatag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14636 cgaaataatttgtcaattgtggggagcacttgaaaaggaaggtatcatagcaaaagatag 14577
Query: 305 acatagaattgaaccataacaaaatatctactatcatggcagaggcaccatttttgataa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14576 acatagaattgaaccataacaaaatatctactatcatggcagaggcaccatttttgataa 14517
Query: 365 cattgtacctttctgtaccagcatggaagtatctttggccaatttcaaaggcaacgacga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14516 cattgtacctttctgtaccagcatggaagtatctttggccaatttcaaaggcaacgacga 14457
Query: 425 aactgtagatgataaaataaaataatccatggccctgagcgcaagaactcttataatagg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14456 aactgtagatgataaaataaaataatccatggccctgagcgcaagaactcttataatagg 14397
Query: 485 ctaaccatgtagagttcaaataaacaatagcaacatagaacaaattcaatgaaatgctcc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14396 ctaaccatgtagagttcaaataaacaatagcaacatagaacaaattcaatgaaatgctcc 14337
Query: 545 acttagtccatgtcggttcatctttaacccaactcaattggattaacaatagtacacatt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14336 acttagtccatgtcggttcatctttaacccaactcaattggattaacaatagtacacatt 14277
Query: 605 ggaaaagaacattgatcatatgtataacatggaaaatgctcatatttctaaaagtccaga 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14276 ggaaaagaacattgatcatatgtataacatggaaaatgctcatatttctaaaagtccaga 14217
Query: 665 accgttttgtttcaaaagtagccggtcctgtctccttgtttcgtaacgatacatactgga 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14216 accgttttgtttcaaaagtagccggtcctgtctccttgtttcgtaacgatacatactgga 14157
Query: 725 agcctccgatggcgatgaagtgagccacaaatatgacgcaaacccaggagataaagcatg 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14156 agcctccgatggcgatgaagtgagccacaaatatgacgcaaacccaggagataaagcatg 14097
Query: 785 gatttaacgcatttacttcgggcgagatatacggcctcaaaccaaactcacaagtagcat 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14096 gatttaacgcatttacttcgggcgagatatacggcctcaaaccaaactcacaagtagcat 14037
Query: 845 taggaacttgtaacatgatcatccgtgttgtttagg 880
||||||||||||||||||||||||||||||||||||
Sbjct: 14036 taggaacttgtaacatgatcatccgtgttgtttagg 14001
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6434
Number of Sequences: 1807
Number of extensions: 6434
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 880
length of database: 10,358,551
effective HSP length: 16
effective length of query: 864
effective length of database: 10,329,639
effective search space: 8924808096
effective search space used: 8924808096
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)